sfaira.train.SummarizeGridsearchEmbedding.plot_active_latent_units

SummarizeGridsearchEmbedding.plot_active_latent_units(organ, topology_version, cvs=None)

Plots latent unit activity measured by empirical variance of the expected latent space. See: https://arxiv.org/abs/1509.00519 If an embedding file is found that contains z, z_mean, z_var (eg. output from predict_variational() function) the model will use z, and not z_mean.