sfaira.versions.metadata.OntologyList¶

class sfaira.versions.metadata.OntologyList(terms: List[Union[str, bool, int]], **kwargs)¶

Basic unordered ontology container.

Node IDs and names are the same.

Attributes

Methods

`convert_to_id`(x)
`convert_to_name`(x)
`get_ancestors`(node)
`is_a`(query, reference)	Checks if query node is reference node.
`is_a_node_id`(x)
`is_a_node_name`(x)
`is_node`(x)
`map_node_suggestion`(x[, include_synonyms, ...])	Map free text node name to ontology node names via fuzzy string matching.
`prepare_maps_to_leaves`([include_self])	Precomputes all maps of nodes to their leave nodes.
`synonym_node_properties`()
`validate_node`(x)