sfaira.versions.metadata.OntologyList.map_node_suggestion

OntologyList.map_node_suggestion(x: str, include_synonyms: bool = True, n_suggest: int = 10)

Map free text node name to ontology node names via fuzzy string matching.

Parameters

• x – Free text node label which is to be matched to ontology nodes.

• include_synonyms – Whether to search for meaches in synonyms field of node instances, too.

• n_suggest – number of suggestions returned

:return List of proposed matches in ontology.